DFBAlab: a fast and reliable MATLAB code for dynamic flux balance analysis
نویسندگان
چکیده
منابع مشابه
MATLAB CODE FOR VIBRATING PARTICLES SYSTEM ALGORITHM
In this paper, MATLAB code for a recently developed meta-heuristic methodology, the vibrating particles system (VPS) algorithm, is presented. The VPS is a population-based algorithm which simulates a free vibration of single degree of freedom systems with viscous damping. The particles gradually approach to their equilibrium positions that are achieved from current population and historically b...
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Vibrating particles system (VPS) is a new meta-heuristic algorithm based on the free vibration of freedom system’ single degree with viscous damping. In this algorithm, each agent gradually approach to its equilibrium position; new agents are generated according to current agents and a historically best position. Enhanced vibrating particles system (EVPS) employs a new alternative procedu...
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Flux Balance Analysis (FBA) has been used in the past to analyze microbial metabolic networks. Typically, FBA is used to study the metabolic flux at a particular steady state of the system. However, there are many situations where the reprogramming of the metabolic network is important. Therefore, the dynamics of these metabolic networks have to be studied. In this paper, we have extended FBA t...
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in this paper, matlab code for a recently developed meta-heuristic methodology, the vibrating particles system (vps) algorithm, is presented. the vps is a population-based algorithm which simulates a free vibration of single degree of freedom systems with viscous damping. the particles gradually approach to their equilibrium positions that are achieved from current population and historically b...
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این پایان نامه بدنبال بررسی کاربرد ارزیابی مستمر در یک محیط یادگیری زبان دوم از طریق طرح چهار سوال تحقیق زیر بود: (1) درک توانایی های فراگیران زمانیکه که از طریق برآورد عملکرد مستقل آنها امکان پذیر نباشد اما در طول جلسات ارزیابی مستمر مشخص شوند; (2) امکان تقویت توانایی های فراگیران از طریق ارزیابی مستمر; (3) سودمندی ارزیابی مستمر در هدایت آموزش فردی به سمتی که به منطقه ی تقریبی رشد افراد حساس ا...
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ژورنال
عنوان ژورنال: BMC Bioinformatics
سال: 2014
ISSN: 1471-2105
DOI: 10.1186/s12859-014-0409-8